Software from NSM R&D Projects

ID Names of the PIs responsible for the software PI Institution Name of the Software Description Further Description
1 Krishna Nandivada IIT Madras IMOP A compiler framework to analyse and optimize OpenMP C programs Read here...
2 Ranjit Thapa SRM University, AP Padarth Khoj: Database We developed the Materials Database to archive comprehensive information on various physical parameters and models essential for understanding material properties. As part of this project, we have also created a module specifically containing data on catalysts used for CO₂ electroreduction (CO₂ ER). Read here...
3 Rupesh Nasre IIT Madras StarPlat Graph DSL This is a domain-specific language for graph algorithms, which generates parallel C++ code for multiple backends. Read here...
4 Chirag Jain Indian Institute of Science, Bengaluru mm2-fast An acceleration version of a widely used DNA sequence alignment software. Read here...
5 Chirag Jain Indian Institute of Science, Bengaluru minichain Long-read DNA sequence aligner to pangenome graphs. Read here...
6 Abhik Choudhury,
Gandham Phanikumar,
M.P. Gururajan,
Saswata Bhattacharyya,
Venkatesh Shenoi,
Vaishali Shah
IISc Bengaluru,
IIT Madras,
IIT Bombay,
IIT Hyderabad,
C-DAC Pune, Savitribai Phule Pune University, Pune
MicroSim A high performance phase-field software stack for execution on both CPUs and GPUs. Read here...
7 Subhas Ghosal
and
Anoop Ayyappan
NIT Durgapur

IIT Kharagpur
Hydromol Web App A web application to search the geometries of Hydrocarbon molecules CnHm (n=1-10; m=1,10). Read here...
8 Subhas Ghosal
and
Anoop Ayyappan
NIT Durgapur

IIT Kharagpur
PyAR - Python code for Aggregation and Reaction A program to build the molecules bottoms-up. Read here...
9 Bratati Kahali CBR, IISc Bengaluru bcl2fastq, GATK, BWA-mem, samtools, bcftools, SAMBAMBA, bam-utilis, REGENIE, Rehh Human whole genome sequencing data analaysis pipeline required software. Read here...
10 Ananth Govind Rajan Indian Institute of Science, Bengaluru ML for nanopores Machine learning applied to the formation of nanopores via silicon-catalyzed electron-beam etching in graphene Read here...
11 Ananth Govind Rajan Indian Institute of Science, Bengaluru String Representations of Nanopore Geometry in 2D Materials This repository contains the necessary MATLAB/Python scripts for developing structure-property relationships, enumerating stable graphene nanopores, and for storing, manipulating, and comparing nanopores in graphene using a new language framework called STring Representations of Nanopore Geometry (STRONGs). Read here...
12 Manish Jain Indian Institute of Science, Bengaluru PARPHOM: PARallel PHOnon calculator for Moiré systems PARPHOM enables the generation of force constants, computation of phononic band structures, and determination of density of states in twisted 2D material systems. Moreover, PARPHOM provides essential routines to investigate the finite temperature dynamics in these systems and analyze the chirality of the phonon bands. Read here...
13 Vaibhav A. Dixit NIPER, Guwahati CYPWare-1.0 This software allows the prediction of electron transfer parameters and rates for the 1st step in the CYP450 catalyzed oxidation reactions. It can be adapted easily for other bacterial and human CYP450 enzymes. Read here...
14 Ramakrishna Upadrasta IIT Hyderabad LLOV, PolyDL/PolyAI LLOV: Static Data-Race Checker for OpenMP Programs,
PolyDL: Polyhedral Optimizations for Creation of High-performance DL Primitives.
Read here...
15 Nikhil D Hegde IIT Dharwad hssedc - Implementation of the 'divide and conquer' algorithm for Superfast HSS eigensolvers. This software implements methods to compute all eigenvalues of hierarchically semiseparable (HSS) matrices in parallel. Shared-memory and distributed-memory algorithms and their respective implementations are presented. links to data sets are provided separately. Read here...
16 Ashoke De IIT Kanpur Multiphase Flow and high-speed flow solvers in OpenFOAM The code is capable of solving multiphase atomization including combustion; while the high-speed solver allows us to solve high-speed flows with accurate shock-capturing schemes. Read here...
17 M. Tanveer IIT Indore CGFTSVM-ID Software corresponding to the paper: A.Kumari, M. Tanveer, C.-T. Lin, “Class probability and generalized bell fuzzy twin SVM for imbal anced data,” IEEE Transactions on Fuzzy Systems, pp. 1–12, 2024, DOI: https://doi.org/10.1109/TFUZZ.2024. 3366936. Read here...
18 M. Tanveer IIT Indore NeuroFuzzy-RVFL Software corresponding to the paper: M. Sajid, A. K. Malik, M. Tanveer and P. N. Suganthan, "Neuro-Fuzzy Random Vector Functional Link Neural Network for Classification and Regression Problems," in IEEE Transactions on Fuzzy Systems, vol. 32, no. 5, pp. 2738-2749, May 2024, doi: 10.1109/TFUZZ.2024.3359652. Read here...
19 M. Tanveer IIT Indore GE-IFRVFL-CIL Software corresponding to the paper: M. A. Ganaie, M. Sajid, A. K. Malik and M. Tanveer, "Graph Embedded Intuitionistic Fuzzy Random Vector Functional Link Neural Network for Class Imbalance Learning," in IEEE Transactions on Neural Networks and Learning Systems, vol. 35, no. 9, pp. 11671-11680, Sept. 2024, doi: 10.1109/TNNLS.2024.3353531. Read here...
20 M. Tanveer IIT Indore Tpin-UTWSVM Software corresponding to the paper: Anuradha Kumari, M. Tanveer, and Alzheimer’s Disease Neuroimaging Initiative. "Universum twin support vector machine with truncated pinball loss." Engineering Applications of Artificial Intelligence 123 (2023): 106427. Read here...
21 M. Tanveer IIT Indore IFLSTSVM and CS-IFLSTSVM Software corresponding to the paper: M. A. Ganaie, M. Tanveer, and C.-T. Lin, “Large-scale fuzzy least squares twin SVMs for class imbalance learning,” IEEE Transactions on Fuzzy Systems, vol. 30, no. 11, pp. 4815–4827, 2022, DOI: https://doi.org/10.1109/TFUZZ.2022.3161729. Read here...
22 Ankit Jain IIT Bombay Anharmonic Lattice Dynamics Calculate semiconducting solids thermal conductivity by considering phonon-phonon scattering. Read here...
23 M. Tanveer IIT Indore IFLSTSVM and CS-IFLSTSVM Software corresponding to the paper: M. A. Ganaie, A. Kumari, A. Girard, J. Kasa-Vubu, M. Tanveer, A. D. N. Initiative, “Diagnosis of Alzheimer’s disease via Intuitionistic fuzzy least squares twin SVM,” Applied Soft Computing, vol. 149, p. 110899, 2023, DOI: https://doi.org/10.1016/j.asoc.2023.110899. Read here...
24 M. Tanveer IIT Indore LS-FLSTSVM-CIL Software corresponding to the paper: M. A. Ganaie, M. Tanveer, and C.-T. Lin, “Large-scale fuzzy least squares twin SVMs for class imbalance learning,” IEEE Transactions on Fuzzy Systems, vol. 30, no. 11, pp. 4815–4827, 2022, DOI: https://doi.org/10.1109/TFUZZ.2022.3161729. Read here...
25 M. Tanveer IIT Indore ILSTSVR Software corresponding to the paper: M. A. Ganaie, M. Tanveer, and Iman Beheshti. "Brain age prediction with improved least squares twin SVR." IEEE Journal of Biomedical and Health Informatics 27, no. 4 (2022): 1661-1669. Read here...
26 M. Tanveer IIT Indore efRVFL and
en-efRVFL
Software corresponding to the paper: A. K. Malik, M. A. Ganaie, M. Tanveer and P. N. Suganthan, "Extended Features Based Random Vector Functional Link Network for Classification Problem," in IEEE Transactions on Computational Social Systems, vol. 11, no. 4, pp. 4744-4753, Aug. 2024, doi: 10.1109/TCSS.2022.3187461. Read here...
27 M. Tanveer IIT Indore Biceph-Net Software corresponding to the paper: A. H. Rashid, A. Gupta, J. Gupta and M. Tanveer, "Biceph-Net: A Robust and Lightweight Framework for the Diagnosis of Alzheimer's Disease Using 2D-MRI Scans and Deep Similarity Learning," in IEEE Journal of Biomedical and Health Informatics, vol. 27, no. 3, pp. 1205-1213, March 2023, doi: 10.1109/JBHI.2022.3174033. Read here...
28 M. Tanveer IIT Indore IFRVFL Software corresponding to the paper: A. K. Malik, M. A. Ganaie, M. Tanveer and P. N. Suganthan, "Alzheimer’s Disease Diagnosis via Intuitionistic Fuzzy Random Vector Functional Link Network," in IEEE Transactions on Computational Social Systems, vol. 11, no. 4, pp. 4754-4765, Aug. 2024, doi: 10.1109/TCSS.2022.3146974. Read here...
29 M. Tanveer IIT Indore FLSPTSVM-CIL Software corresponding to the paper: M. A. Ganaie, M. Tanveer, and Alzheimer’s Disease Neuroimaging Initiative. "Fuzzy least squares projection twin support vector machines for class imbalance learning." Applied Soft Computing 113 (2021): 107933, doi: https://doi.org/10.1016/j.asoc.2021.107933. Read here...
30 M. Tanveer IIT Indore FAF-DRVFL Software corresponding to the paper: Rahul Sharma, Tripti Goel, M. Tanveer, Shubham Dwivedi, and R. Murugan. "FAF-DRVFL: Fuzzy activation function based deep random vector functional links network for early diagnosis of Alzheimer disease." Applied Soft Computing 106 (2021): 107371, doi: https://doi.org/10.1016/j.asoc.2021.107371 Read here...
31 Prasad Perlekar TIFR Hyderabad FLUID3D We have developed a multi-GPU parallel spectral solver to study a variety of multiphase flows. Read here...
32 T. J. Dhilip Kumar IIT Ropar PES2MP The program integrates ab initio softwares to softwares performing collisional dynamics. Read here...
33 Debabrata Sikdar
and
Prithwijit Guha
IIT Guwahati iDT-NaPaMeGs: AI based Forward & Inverse Design Toolkit for Nanoparticle Meta-grid Assisted Photonic Devices iDT-NaPaMeGs is a deep-learning based tool for providing optimized parameters of nanoparticle meta-grid to achieve desired transmission characteristics over specific wavelength range in nanoparticle meta-grid assisted photonic devices. Read here...
34 Phani Motamarri IISc Bengaluru PPA-FE Chemical bonding using projected population analysis for large-scale systems (PPA-FE). Read here...
35 Phani Motamarri IISc Bengaluru FEMatFreeMultiVec Hardware-aware matrix-free computations of finite-element discretised matrix multi-vector products. Read here...
36 Phani Motamarri IISc Bengaluru PAW-FE Massively parallel projector-augmented wave (PAW) based density functional theory calculations using finite-element discretization for ab initio modeling of materials. Read here...
37 Phani Motamarri IISc Bengaluru NCSOC-DFT-FE Finite-element methods for non-collinear magnetism and spin-orbit coupling in pseudopotential DFT calculations. Read here...
38 Tapan Sengupta
and
Aditi Sengupta
IIT (ISM) Dhanbad CompNS - Compressible Navier-Stokes solver This is an in-house finite difference code for solving the 3D compressible Navier-Stokes equations using a novel parallel algorithm. Used to solve the Rayleigh-Taylor instability and combined Kelvin-Helmholtz Rayleigh-Taylor instability problems using a 4.2 billion mesh. Read here...
39 Unnikrishnan C IIT Palakkad Meerkat This is a framework for dynamic graph algorithms using warp level primitives. This work was published in International Journal of Parallel Programming (IJPP), Vol 52, 2024. Read here...
40 Unnikrishnan C IIT Palakkad STGraph STGraph is a Framework for Temporal Graph Neural Networks. This work was published in GrAPL workshop at IPDPS 2024. Read here...
41 Prateek Sharma,
Bhargav Vaidya,
Deovrat Prasad,
Andrea Mignone,
Luca Rickler
IISc Bengaluru PLUTO MHD The RKL module for parabolic terms were added in this well-known public astrophysical MHD code. Several other small stuff was implemented, some of which are not included in the public code. Read here...
42 Anupam Gupta IIT Hyderabad ABM_VE_Porous_Matrix_Viscous_Tissue This code simulates the growth of viscous tissue encapsulated in a porous viscoelastic matrix. Read here...
43 Ratnesh K. Shukla IISc Bengaluru HyPE-Parallel Solution of hyperbolic (along with diffusion) PDEs in parallel PETSc framework using fourth-order accurate conservative finite volume methods. Read here...
44 Niranjan S. Ghaisas IIT Hyderabad PadeOps-igrid A high-order accurate large eddy simulation (LES) code for simulating turbulent boundary layer flows. Read here...
45 Animesh Kuley IISc Bengaluru G2C3 (Global Gyrokinetic Code using Cylindrical Coordinates) G2C3 (Global Gyrokinetic Code using Cylindrical Coordinates) is a particle-in-cell (PIC) code developed at the Plasma Theory Group (PTG) at the Indian Institute of Science (IISc) to study kinetic instabilities in magnetically confined fusion plasma. Read here...
46 Anand Srivastava IISc Bengaluru multiplescaffoldtypesDTMC Membrane Remodeling Due to a Mixture of Multiple Types of Curvature Proteins. Read here...
47 Anand Srivastava IISc Bengaluru tSNE-IDP-Clsutering Clustering Heterogeneous Conformational Ensembles of Intrinsically Disordered Proteins with t-Distributed Stochastic Neighbor Embedding. Read here...
48 Anand Srivastava IISc Bengaluru SOP-MULTI OP-MULTI: A self-organized polymer based coarse-grained model for multi-domain and intrinsically disordered proteins with conformation ensemble consistent with experimental scattering data. Read here...
49 Burra V.L.S Prasad K L E F University, Andhra Pradesh PEA Calculator PEA Calculator calculates the Percen Epitope Accessibility of peptide vaccine candidates. Read here...
50 Burra V.L.S Prasad K L E F University, Andhra Pradesh Biobhasha (Biological Programming Language) Biobhasha is an object oriented application framework developed in C++ for extraction, manipulation and analysis of biological data. It is a compilation of several biological abstract data types (BioADTs) resulting from abstraction of biological entities into relevant classes. Read here...
51 Nagaiah Chamakuri IISER, Thiruvananthapuram Eletro-Mechanical solver (dune-em) Implementation of Electro-Mechanical model solver based on the Dune software. Read here...
52 Kishalay Mitra IIT Hyderabad Wind Behavior Modelling Time Series Analysis and modelling of wind behavior. Read here...